Commits · b5f81db2753bc4501b4ef84f54a1fe883e7965bb · Raphael / histream

21 Aug, 2015 4 commits
- static createInstance will use supplied id and source information · b5f81db2
  R.W.Majeed authored Aug 21, 2015
  
  b5f81db2
- Changed configuration to include meta source element with timestamp. · b2ad31fc
  R.W.Majeed authored Aug 21, 2015
  
  b2ad31fc
- changed test data patient ids to explicitly non-numeric · b4859a26
  R.W.Majeed authored Aug 21, 2015
  
  b4859a26
- Static accessor methods for observation extensions, implementation for... · 2284240d
  R.W.Majeed authored Aug 21, 2015
```
Static accessor methods for observation extensions, implementation for patient, visit. i2b2VisitStore incomplete
```
  2284240d
14 Aug, 2015 1 commit
- JAXB fact xml now namespace aware · bc1574af
  R.W.Majeed authored Aug 14, 2015
  
  bc1574af
12 Aug, 2015 1 commit
- JAXB fact provider uncoupled from old XML fact provider · aa194cef
  R.W.Majeed authored Aug 12, 2015
  
  aa194cef
05 Aug, 2015 5 commits
- prototype of observation supplier · 16c093a2
  R.W.Majeed authored Aug 05, 2015
  
  16c093a2
- allow null as value · 592211b6
  R.W.Majeed authored Aug 05, 2015
  
  592211b6
- now comparable · 6bfa31e1
  R.W.Majeed authored Aug 05, 2015
  
  6bfa31e1
- concepts are loaded for patient+visit tables · e5be0fb5
  R.W.Majeed authored Aug 05, 2015
  
  e5be0fb5
- fixed datasource errors · 4abdb076
  R.W.Majeed authored Aug 05, 2015
  
  4abdb076
04 Aug, 2015 7 commits
- Added interfaces for FactTable and FactRow · c0520a2e
  R.W.Majeed authored Aug 04, 2015
  
  c0520a2e
- javadoc · a90b0f1d
  rwm authored Aug 04, 2015
  
  a90b0f1d
- column types for integer and decimal · 2221723e
  rwm authored Aug 04, 2015
  
  2221723e
- base type for Column · 8ed00085
  rwm authored Aug 04, 2015
  
  8ed00085
- wide table parsing implemented with basic functionality · 3d658d95
  rwm authored Aug 04, 2015
  
  3d658d95
- simplified exceptions, visit table parsing successful · 469a02e9
  R.W.Majeed authored Aug 04, 2015
  
  469a02e9
- test added for formats with optional parts · 17dc54c4
  R.W.Majeed authored Aug 04, 2015
  
  17dc54c4
03 Aug, 2015 6 commits
- extend VisitImpl · 6b8c1201
  R.W.Majeed authored Aug 03, 2015
  
  6b8c1201
- abstract table with generics · a1ce3fa4
  R.W.Majeed authored Aug 03, 2015
  
  a1ce3fa4
- processing of patient tables implemented · df24a214
  R.W.Majeed authored Aug 03, 2015
  
  df24a214
- corrections of test data · 9a9650da
  R.W.Majeed authored Aug 03, 2015
  
  9a9650da
- utilize DateTimeFormatter for parsing of incomplete dates · ea0400c5
  R.W.Majeed authored Aug 03, 2015
  
  ea0400c5
- non-jaxb types moved out of config package · 21e68406
  R.W.Majeed authored Aug 03, 2015
  
  21e68406
02 Aug, 2015 1 commit
- typed columns · 334d4ff3
  R.W.Majeed authored Aug 02, 2015
  
  334d4ff3
31 Jul, 2015 1 commit
- Import module for any table based format · b2b13333
  R.W.Majeed authored Jul 31, 2015
  
  b2b13333
29 Jul, 2015 1 commit
- junit dependency version moved to parent pom · 70b98829
  rwm authored Jul 29, 2015
  
  70b98829
28 Jul, 2015 3 commits
- Concept.getIDs renamed to getNotations. Added method for Concept.getID. · 4169fab0
  rwm authored Jul 28, 2015
```
i2b2 import uses unique ids.
```
  4169fab0
- documentation · 4c18fcdb
  R.W.Majeed authored Jul 28, 2015
  
  4c18fcdb
- allow specification of scheme for i2b2 ontology · 5a0e07a1
  R.W.Majeed authored Jul 28, 2015
  
  5a0e07a1
27 Jul, 2015 5 commits
- Leaf concepts without notations will show as empty folders. Insertion of · 1fafc9d4
  R.W.Majeed authored Jul 27, 2015
```
visual_attributes and basecode grouped together.
```
  1fafc9d4
- wrap RDFParseException with IOException · bd18f59b
  R.W.Majeed authored Jul 27, 2015
  
  bd18f59b
- Updated dependency to latest version of Sesame · 98a32fce
  R.W.Majeed authored Jul 27, 2015
  
  98a32fce
- Rewrote public methods for more consistent API · c97859d2
  R.W.Majeed authored Jul 27, 2015
  
  c97859d2
- Create store with URL arguments instead of File · af0e1d37
  R.W.Majeed authored Jul 27, 2015
  
  af0e1d37
24 Jul, 2015 3 commits
- Use only one baseURI for all ontology files, accept Iterable<File> · ee97e1a0
  rwm authored Jul 24, 2015
```
instead of File[]
```
  ee97e1a0
- Potential resource leaks closed · 4e295426
  rwm authored Jul 24, 2015
  
  4e295426
- install test-jar in repository for test dependencies · 9be23954
  rwm authored Jul 24, 2015
  
  9be23954
21 Jul, 2015 2 commits
- scheme support for concepts/ontologies · 247cf35f
  rwm authored Jul 21, 2015
  
  247cf35f
- skos:hasTopConcept, skos:narrower, skos:broader will be inferred from · 10f3c337
  rwm authored Jul 21, 2015
```
inverse relations.
```
  10f3c337