report interface moved to report-manager

src/main/java/org/aktin/report/Report.java

-package org.aktin.report;
-
-import java.io.IOException;
-import java.io.InputStream;
-import java.nio.file.Path;
-
-/**
- * Interface for reports. 
- * A report specifies (1) which data should be extracted, (2) one or more R scripts
- * to execute with the extracted data and (3) transformation scripts to generate 
- * PDF or HTML reports.
- * 
- * TODO move this file to the report-manager project
- * 
- * @author R.W.Majeed
- *
- */
-public interface Report {
-
-	/**
-	 * Get the report name
-	 * @return report name
-	 */
-	String getName();
-	
-	/**
-	 * Get concept names which are guaranteed to occur only once per encounter.
-	 * These concepts will be included in the generated encounter data table.
-	 * @return concept IDs
-	 */
-	String[] getEncounterConcepts();
-	/**
-	 * Get concepts names which may repeat in a given encounter. For each
-	 * of these concepts, a separate data table will be generated.
-	 * @return concept IDs
-	 */
-	String[] getRepeatingConcepts();
-	
-	/**
-	 * Copies all scripts and resource needed for the Rscript invocation
-	 * to the specified working directory. The file names of all copied
-	 * resources are returned on exit.
-	 * 
-	 * @param workingDirectory working directory for the R invocation.
-	 * @return file names of the copied resources. The first element of the
-	 * returned array is the main script that should be run to generate
-	 * the report resource.
-	 *
-	 * @throws IOException IO error. No files were copied.
-	 */
-	String[] copyResourcesForR(Path workingDirectory)throws IOException;
-	
-	/**
-	 * Copies all transformation scripts needed for the XML-FO transformation
-	 * to generate a PDF report to the specified working directory.
-	 * 
-	 * 
-	 * @param workingDirectory for the Apache FOP invocation
-	 * @return files names of copied resources. At least two files must
-	 * be returned: First element the XML input file and second element 
-	 * is the XSL file.
-	 * 
-	 * @throws IOException IO error. No files were copied.
-	 */
-	String[] copyResourcesForFOP(Path workingDirectory)throws IOException;
-	
-	/**
-	 * Read static resource for web reports. Static resources are independent
-	 * of any generated report data. E.g. css, images, javascript files
-	 * @param path to the static resource
-	 * @return input stream or {@code null} if the resource is not available
-	 */
-	InputStream readStaticWebResource(String path);
-}