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#NEXUS

[
=============
Summary Trees
=============

Summary trees generated by SumTrees.

Summarization Information
-------------------------
Trees read from 1 source(s):
- 'PlantagoITS.boot.tre'
Total of 1000 trees analyzed for summarization:
- All trees were treated as unweighted
- All trees were unrooted
- 82 unique taxa across all trees
- 7757 unique splits out of a total of 162000 splits
- 7674 unique non-trivial splits counted out of a total of non-trivial 79000 splits
Summarized onto consensus tree with minimum clade frequency threshold of 0.5:
- Target tree(s) rotated to set outgroup: 'Plantago uniflora'
- Support values expressed as percentages
- Edge lengths on target trees set to mean of edge lengths in sources
- Support and other summarization annotations added to target trees as metadata

Program Information
-------------------
SumTrees 4.0.0 (Jan 31 2015) by Jeet Sukumaran and Mark T. Holder
Using None, located at: '/home/jannes/Additional_applications/miniconda2/envs/py3-sumtrees/lib/python3.4/site-packages/DendroPy-4.0.3-py3.4.egg/dendropy'
Running under Python 3.4.5 |Continuum Analytics, Inc.| (default, Jul  2 2016, 17:47:47) (GCC 4.4.7 20120313 (Red Hat 4.4.7-1)), located at: '/home/jannes/Additional_applications/miniconda2/envs/py3-sumtrees/bin/python'

Execution Information
---------------------
Executed on jannes-pc by jannes@jannes-pc
Working directory: '/home/jannes/Desktop/Plantago'
Started at: 2019-02-25 14:33:34.373243
Ended at: 2019-02-25 14:33:44.429611
Total elapsed time: 10.056368 seconds
Actual analysis time: 9.803266 seconds

Citation Information
--------------------

  Sukumaran, J and MT Holder. 2010. DendroPy: a Python library for
    phylogenetic computing. Bioinformatics 26: 1569-1571.

  Sukumaran, J and MT Holder. SumTrees: Phylogenetic Tree
    Summarization. 4.0.0 (Jan 31 2015). Available at
    https://github.com/jeetsukumaran/DendroPy.

]
BEGIN TAXA;
    DIMENSIONS NTAX=82;
    TAXLABELS
        Plantago_uniflora
        Plantago_rigida_new_48
        Plantago_major
        Plantago_camtschatica
        Plantago_rugelii
        Plantago_media
        Plantago_stauntonii
        Plantago_amplexicaulis
        Plantago_webbii
        Plantago_mauretanica
        Plantago_arenaria
        Plantago_afra
        Plantago_brasiliensis
        Plantago_erecta
        Plantago_aristata
        Plantago_patagonica
        Plantago_cretica
        Plantago_lagopus
        AY101895_P_atrata_Kaukasus
        DCA_1031_P_cafra_South_Africa
        DCA_1406_P_cafra_South_Africa
        DCA_1405_P_cafra_South_Africa
        DCA_1032_P_cafra_South_Africa
        AY101896_P_nivalis_Spain
        AY101898_P_lanceolata_unknown
        AY101877_P_alpina_unknown
        AY101879_P_maritima_unknown
        HQ593837_P_maritima_unknown
        DCA_1397_P_maritima_Russia
        AY101878_P_subulata_unknown
        DCA_1399_P_subulata_Spain
        DCA_1024_P_crassifolia_South_Africa
        DCA_1025_P_crassifolia_South_Africa
        DCA_1026_P_crassifolia_South_Africa
        DCA_1027_P_crassifolia_South_Africa
        DCA_1029_P_crassifolia_South_Africa
        DCA_1030_P_crassifolia_South_Africa
        DCA_1038_P_crassifolia_South_Africa
        DCA_1396_P_crassifolia_South_Arica
        AF515217_P_coronopus_England
        DCA_1403_P_crassifolia_Spain
        AY101881_P_crassifolia_unknown
        DCA_1413_P_coronopus_South_Africa
        DCA_1033_P_coronopus_South_Africa
        AY101882_P_coronopus_Denmark
        HQ593830_P_coronopus_unknown
        HQ593832_P_coronopus_unknown
        HQ593833_P_coronopus_unknown
        DCA_1424_P_coronopus_Italy
        DCA_1430_P_coronopus_Malta
        DCA_1431_P_coronopus_Iran
        DCA_1432_P_coronopus_Spain
        DCA_1433_P_coronopus_Kuwait
        DCA_1436_P_coronopus_Bahrain
        DCA_1438_P_coronopus_Montenegro
        DCA_1443_P_coronopus_Saudi_Arabia
        DCA_1390_P_coronopus_Algeria
        DCA_1391_P_coronopus_Algeria
        DCA_1392_P_coronopus_Morocco
        DCA_1395_P_coronopus_Tunisia
        DCA_1097_P_coronopus_Turkey
        DCA_1394_P_coronopus_Spain
        DCA_1036_P_coronopus_South_Africa
        DCA_1407_P_coronopus_Spain
        HQ593835_P_macrorhiza_unknown
        HQ593834_P_macrorhiza_unknown
        AY101883_P_macrorhiza_unknown
        AY101880_P_serraria_unknown
        DCA_1425_P_serraria_Italy
        AY101884_P_subspathulata_Portugal
        1470
        1471
        1473
        DCA_1408_P_coronopus_South_Africa
        DCA_1444_P_coronopus_Iran
        KF815505_P_coronopus_Saudi_Arabia
        DCA_1440_P_coronopus_Portugal
        DCA_1441_P_coronopus_Portugal
        DCA_1401_P_crassifolia_Spain
        DCA_1402_P_crassifolia_Greece
        DCA_1037_P_crassifolia_South_Africa
        1472
  ;
END;

BEGIN TREES;
    TREE 1 = [&U] 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